miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST008388
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATACTCCCTCCGTCCCAAAT

miRNA*
TTGGGACGGAGGGAGTATAAC

mismatches: 0
bulges: 0

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pre-miRNA
ACNNATTGTATACTCCCTCCGTCCCAAATTGTATGTCACTTAGGAAAAAATATTTGTCCCAAATTGTATGTTGCTTTACAATACCAATGAAAAATTAATG
TTACTTTTCCTATTATATCCTTAACTATTTATTACTCTCTCTTCTTTCAATTCCTTCATTTATCTTTTTCATATCATTTATTGAGGACAATTTTGTAAAA
CAACTCATAATATCTCTTTCCCACACAATATTAATTACATTTCTTAATATGTGTGAAATGCCCAAAACGTCATACAATTTGGGACGGAGGGAGTATAACA
TTGG


dot-bracket secondary structure
........(((((((((((((((((((((((((((.((.((.(((((..(((((..........((...((((.(((((((..((.((((((((..((((
........................................................))))....)))))))).(((.....)))))......))))))).
)))).)).)))))...)))))((((((.((((((.........)))))))))))))).))..........)))))))))))))))))))))))))))...
....



SIMILARITIES
miRBase tae-MIR1122: 0.0002

PMRD osa-miRf10322-akr: 0.00006

microPC no hits
UniProt no hits

RFAM MIR806: 0.0003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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