miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000093
species: Arachis duranensis
miRNA family: miR156b-3p
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTCTCTAAGCTTCTGTCATC

miRNA*
 TGACAGAAGATAGAGAGCAC

mismatches: 3
bulges: 1
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pre-miRNA
 CACTATTGGTAGAGTTGTTGACAGAAGATAGAGAGCACAAAAGATGATATGCATATAGATATATATAGTCACATACATACACATATACACATATGGATGG
ATCCAAAGCCAATTGCATTTTATTCCTTTGTGCTCTCTAAGCTTCTGTCATCACTCTTCAGCCTCTA

dot-bracket secondary structure
.......((((((((...(((((((((.(((((((((((((.(((((.(((((..............(((.(((.((((............)))).))))
))...........))))).)))))..)))))))))))))..)))))))))..)))))...)))....


SIMILARITIES
miRBase ahy-MIR156b: 3e-24

PMRD ptc-miR156j: 0.000000009

microPC miR157: 0.000008		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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