miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Fragaria vesca



ABOUT THIS RECORD

ID: MNEST046687
species: Fragaria vesca
source: microPC, original name: miR156

Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGAAGATAGAGAGCACA

miRNA*
 TGCTCTCTATGCTTCTG

mismatches: 0
bulges: 1
View larger
pre-miRNA
 CAGAAGATAGAGAGCACAGATGGATGACTTGCAATGAATATGCATCTCACTCCTTTGTGCTCTCTATGCTTCTG

dot-bracket secondary structure
((((((((((((((((((((.((((((..((((.......))))..))).))))))))))))))))).))))))


SIMILARITIES
miRBase ptc-MIR156j: 9e-16

PMRD ptc-miRf10223-akr: 9e-16

microPC miR157: 1e-36		UniProt no hits

RFAM no hits

Identical with: miR157 from microPC (MNEST046830)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;