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Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Oryctolagus cuniculus, Cavia porcellus, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST004985
species: Mus musculus
miRNA family: miR-675
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTATGCCCTAACCGCTCAGT

miRNA*
TGGTGCGGAAAGGGCCCACAGT

mismatches: 4
bulges: 1

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pre-miRNA
GACTGGTGCGGAAAGGGCCCACAGTGGACTTGGTACACTGTATGCCCTAACCGCTCAGT

dot-bracket secondary structure
.(((((.((((..(((((..((((((.((...)).))))))..)))))..)))))))))


SIMILARITIES
miRBase mmu-mir-675: 8e-28

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-675: 8e-16
most similar mature miRNAs

Identical with: mmu-mir-675 from miRBase (MNEST032291)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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