miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gnetum gnemon



ABOUT THIS RECORD

ID: MNEST000736
species: Gnetum gnemon
miRNA family: MIR4208
source: miRNEST

Taxonomy by NCBI:
Gnetum gnemon Gnetum Gnetaceae Gnetales Gnetopsida Gnetophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGATTTTATTTTTGGCAATGC

miRNA*
ATTGTTTGAGCATTGTCACA

mismatches: 5
bulges: 1

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pre-miRNA
GAAGGCAGTGTTGATTTTATTTTTGGCAATGCTACAGCATTGTTTGAGCATTGTCACATTCACTGC

dot-bracket secondary structure
....((((((.((((.....(((.((((((((....)))))))).)))....))))....))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9LVQ0|PME31_ARATH: 0.000004

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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