miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST045574
species: Helianthus annuus
miRNA family: MIR157
source: microPC, original name: miR157

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGACAGAAGATAGAGAGCAC

miRNA*
GCTCTCTATGCTTCTGTCA

mismatches: 1
bulges: 1

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pre-miRNA
TTGACAGAAGATAGAGAGCACAGAGAAGCATGAATTGCACATAGATATTGCAATTCACTCCTTCGTGCTCTCTATGCTTCTGTCA

dot-bracket secondary structure
.((((((((((((((((((((..((.((..(((((((((.........))))))))))).))..))))))))))).)))))))))


SIMILARITIES
miRBase aqc-MIR156b: 0.00000002

PMRD han-miR157a: 4e-43

microPC miR157: 2e-42
UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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