miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST046119
species: Helianthus annuus
source: microPC, original name: miR167

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGCTGCCAGCATGATCT

miRNA*
 GTCATGGTTGCAGCTT

mismatches: 2
bulges: 0
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pre-miRNA
 AAGCTGCCAGCATGATCTGATAATGCCAAACTGATTTGCCTATGTGTTTTTGTGTCATGGTTTCTAGTGTGTATGTAGATTAACTGTGTCTTGTGGGGTG
TTCTAGTGTGTGTGTGTGTTTTCATGGTGTATCCAGTGTGTGTGTTTATGGGTAGGGTAAAGAAAGGTTAATCAGGTCATGGTTGCAGCTT

dot-bracket secondary structure
(((((((.(.(((((((((((...(((...((..((((((((((......((..((((((.....(..(..((..((.((((...(..(((....)))..
)..)))).))..))..)..).))))))..))...............))))))))))....))...)))..))))))))))).).)))))))


SIMILARITIES
miRBase zma-MIR167f: 0.0002

PMRD zma-miR167l: 0.0002

microPC miR167: 7e-22		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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