miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000895
species: Helianthus tuberosus
miRNA family: MIRf58
source: miRNEST

Taxonomy by NCBI:
Helianthus tuberosus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GATCATGCGATCTCTTCGGAA

miRNA*
CCAAGGGATCGCATTGATCCA

mismatches: 0
bulges: 2

View larger
pre-miRNA
CGGGTTGAGCTTCCAAGGGATCGCATTGATCCATCTGTCCACTCGGATTTCAATCTCAGTTGATAATTTGGATCATGCGATCTCTTCGGAAGCTTCCTCC


dot-bracket secondary structure
.(((..((((((((((((((((((((.((((((..((((.(((.((((....)))).))).))))...)))))))))))))))))).)))))))))))..



SIMILARITIES
miRBase zma-MIR393b: 0.00007

PMRD zma-miR393f: 0.00007

microPC miR393: 1e-37
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;