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Species belonging to selected taxon:
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Parthenium argentatum
,
Zinnia violacea
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST002850
species:
Zinnia violacea
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Zinnia violacea
Zinnia
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACATCATCATCATCATCTTCT
miRNA*
TGATGATGATGATGATTTG
mismatches:
1
bulges:
2
View larger
pre-miRNA
GCCTTGTCACA
ACATCATCATCATCATCTTCT
TCTTGTTGTTCTTCCACTTCAACAACATCTTTATTTGCATCTAATTCATGTTCTTCTGCTTTGCCTTT
ATTCCCACCTTGTTTCTTGTGGTCAAGATTCAATGAACCCGGTTCACAATTGTTGACAGAAGCTGGATTCCTTGACACCCACCTGGGATTTCTTTGGATT
CGAGTGGTGGTGG
TGATGATGATGATGATTTG
GGATCAAC
dot-bracket secondary structure
.(((.((((..
.((((((((((((((((..((
.((((..((((..((((...(((((......((...(((......................)))...)
)........)))))....))))..((((.((((.(((.((((((................)))))).))).))))..(((....)))...)))).)))).
)))).)).)))))
))))))))))).))))..)
))......
SIMILARITIES
miRBase
no hits
PMRD
ghr-miR414f
:
0.0000002
microPC
no hits
UniProt
no hits
RFAM
mir-598: 0.000004
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record