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Species belonging to selected taxon:
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST003161
species:
Helianthus annuus
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Helianthus annuus
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCGTTC
miRNA*
ACAGAGGAAAATGAAAGTGAAG
mismatches:
5
bulges:
1
View larger
pre-miRNA
TCATCGTATCA
TCATCATCATCATCATCGTTC
AATCCCAGATCTTCATCATCATTTTTTGAAACCCTAAACCTTCATCGTACTCAGCCATTTCCTCTGTT
ACGAAACGCTAATGGCCATTTCAAACATAATCAAAGCAAGCAATTGATAGCTCTTTTGATTAAAGATGACTTTATATTTGCAATAGAATAATGTTAAGCT
TCATCCAGATGGATATTTAGTCATTATTCACGTTCACTCATGGTAGCCAGACGCCGTCGGTTTCAATCCCGTTTTTATTGTGTTCGTTGACGGTGGTCCA
AGTTCAGTTTGCATCATAATCTCCCCGATTATTGAGAGACGAGGGTGGGTTACAAAGTGAGATGATAGGGTGA
ACAGAGGAAAATGAAAGTGAAG
AAGCA
ACC
dot-bracket secondary structure
.....((.((.
((((..((((..((.((((((
...(((......(((((.((((..((((.(((((...((((((.((...((((((((((.....((((
....))))..)))))).((..(((((.(((((((((..(((........))).)))))))))..((((((((.(((((...........))))).)))..
)))))..(((((((.....((((.....((((.......((((.((((.(((...)))))))......))))......)))).....))))....)))))
...)).))))).)).((((((.....)))))))))).)).))))))))))).)))))))))))))..))).))
)).)).))..))))..)))).)
).)).
...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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