miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST003167
species: Helianthus annuus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATTA

miRNA*
 ATGACGATATGAGTTGGTA

mismatches: 4
bulges: 2
View larger
pre-miRNA
 TTTTTTTTTTTTGGGTCCACAACCAAAGTTTTTTTCTTCTTCATCATCATCATCATCATTAGTGAGACATGGTTTAATCAAAGAAAACGTAAATAGAAAT
TAAAAGATTTGCCAACTCCAAAATGAGCTGCTTCTGGATTAAAAGACCACTGATCACAAAAGCTTCAGCCCACCAGTTACATCATCAACCATATCAGCTG
GCCCAAGAACTGCCATCACTGTCCTTGAATTTGGTGCTATTTGCGTTCTACCAGCATCAATGACGATATGAGTTGGTATAGACAATGATTTTGCTCTTTT
TTGTAATTCCAACAT

dot-bracket secondary structure
..........(((((...((((.(((((((.((.(((...(((...((((.(((.(((((.(((.....((((........(((..((((((((((..((
((((.(((.(...((((......(((...((((.(((((((.........))))).)).)))).))).......))))).))).((((......(((.((
((.........))))...)))...)))).)))))).))))))))))))))))).))).))))).)))))))..)))...))).)).))))))).......
))))...)))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q3ZBL5|PTH2_BOVIN: 0.00000005

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




Liczniki na strone;