miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus

ABOUT THIS RECORD

ID: MNEST046316
species: Helianthus annuus
source: microPC, original name: miR1044

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTGTAGTGCGTATTTATTTT

miRNA*
AATGTAATGCATTCAA

mismatches: 3
bulges: 2

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pre-miRNA
TTGTAGTGCGTATTTATTTTTAATTTTAAAAAAAATGTAATGCATTCAA

dot-bracket secondary structure
.((.(((((((...(((((((.........)))))))..))))))))).

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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