miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST046843
species: Helianthus petiolaris
miRNA family: MIR403
source: microPC, original name: miR403

Taxonomy by NCBI:
Helianthus petiolaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTAGATTCACGCACAAACTCG

miRNA*
 TGTTTGTGCGTGAATCTAAGG

mismatches: 1
bulges: 0
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pre-miRNA
 CGTGTTTGTGCGTGAATCTAAGGATCCTTAATCTTATCACATCACCAGTAATCATACTTTTTGTTTGTCTGTTGCCAGTCAGGATCTGTTGGTTCGTTAG
ATTCACGCACAAACTCG

dot-bracket secondary structure
((.((((((((((((((((((.((.((...(((((..(....((.(((....((.((.....)).)).))).))...)..))))).....)).)).))))
)))))))))))))).))


SIMILARITIES
miRBase vvi-MIR403e: 0.000006

PMRD vvi-miR403e: 0.000006

microPC miR403: 7e-55		UniProt no hits

RFAM MIR403: 0.0001

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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