miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST046694
species: Helianthus tuberosus
miRNA family: MIR393
source: microPC, original name: miR393

Taxonomy by NCBI:
Helianthus tuberosus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCCAAAGGGATCGCATTGATC

miRNA*
TCATGCGATCTCTTCGGA

mismatches: 1
bulges: 1

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pre-miRNA
TCCAAAGGGATCGCATTGATCCATCTGTCCACTCGGATTTCAATCTCAGTTGATAATTTGGATCATGCGATCTCTTCGGA

dot-bracket secondary structure
(((.((((((((((((.((((((..((((.(((.((((....)))).))).))))...)))))))))))))))))).)))


SIMILARITIES
miRBase zma-MIR393b: 0.0000002

PMRD zma-miR393f: 0.0000002

microPC miR393: 4e-40
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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