miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000891
species: Helianthus tuberosus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Helianthus tuberosus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTTCTTCATCATCATCGTCA

miRNA*
ACGATAGTGAAAGGACCTG

mismatches: 3
bulges: 2

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pre-miRNA
TTTATATCCAGATTTCTTCATCATCATCGTCATCGCCTGCAACTAAACCACAACCGATCAACATTCTTTCTTTCTTACTCCATGACGATAGTGAAAGGAC
CTG
CTTCGAAC


dot-bracket secondary structure
........(((..(((((..((((.((((((((................................................)))))))).))))))))).
)))
........



SIMILARITIES
miRBase ath-MIR414: 0.0003

PMRD ghr-miR414b: 0.00002

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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