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Species belonging to selected taxon:
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST000905
species:
Helianthus tuberosus
miRNA family:
MIR530
source:
miRNEST
Taxonomy by NCBI:
Helianthus tuberosus
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCATTTGCACCTGCACCTTT
miRNA*
AGGTGCAAGTCAAATGCAGG
mismatches:
1
bulges:
1
View larger
pre-miRNA
TTGCCTTTGCC
TGCATTTGCACCTGCACCTTT
CTACTTTTCTTTTCCTCCATCTCCATCCTTACCGTCCAACAACATTATCACCATGTACATTAGAAGAG
CGGAA
AGGTGCAAGTCAAATGCAGG
TTAATACA
dot-bracket secondary structure
........(((
((((((((.((.(((((((((
((.(((((((.......(((................................)))......)))))))
.))))
))))))).))))))))))))
).......
SIMILARITIES
miRBase
ptc-MIR530a
:
0.000006
PMRD
ptc-miRf11025-akr
:
0.000006
microPC
miR1030
:
0.000000002
UniProt
no hits
RFAM
MIR530: 0.0001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record