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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum



ABOUT THIS RECORD

ID: MNEST001048
species: Hordeum vulgare
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTATTTTGGGACGGAGGGAGT

miRNA*
 TCCCTCCGTCCCAAAATAAGT

mismatches: 0
bulges: 0
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pre-miRNA
 GTACTCCCTCCGTCCCAAAATAAGTCTCTTAAGCTTAGTATAACTTTGTACTAGCTCTAGTACAAAGTTGATACAGTTATTTTGGGACGGAGGGAGTA

dot-bracket secondary structure
.((((((((((((((((((((((((.......))...((((((((((((((((....)))))))))))).))))..))))))))))))))))))))))


SIMILARITIES
miRBase osa-MIR1862c: 0.000001

PMRD osa-miRf11605-akr: 0.0000003

microPC miR1439: 8e-51		UniProt no hits

RFAM MIR1122: 3e-32		most similar mature miRNAs

Identical with: miR1439 from microPC (MNEST045970)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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