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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum



ABOUT THIS RECORD

ID: MNEST001097
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTTCCTAAATA

miRNA*
TTTAGGAACGGAGGGAGTACG

mismatches: 0
bulges: 0

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pre-miRNA
GTCGAAAATTATTGTCAGTGATGTACTCCCTCCGTTCCTAAATATAAGTCTTTTAAGAGATTTCACTAAGAGACTACATACAAAACAAAATGAGTGAATC
TATACTTTAAAGTATGTCTAAATACATCAGTATGTAGTCCTATAATGAAACCTCTAAAAAAAAGACTTATATTTAGGAACGGAGGGAGTACGATGTATGC
ATGGTGCGATGT


dot-bracket secondary structure
((((...(((((.((..(((.(((((((((((((((((((((((((((((((((.((((.(((((.((((.((((((((((.........((((((....
((((((....))))))......))).))))))))))))))).)).))))).))))....)))))))))))))))))))))))))))))))))...)))))
))))).))))..



SIMILARITIES
miRBase tae-MIR1122: 3e-18

PMRD tae-miR1122: 3e-18

microPC miR1436: 2e-35
UniProt no hits

RFAM MIR1122: 4e-30
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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Liczniki na strone;