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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum



ABOUT THIS RECORD

ID: MNEST001136
species: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTCCCTCCGTCTCAAAATAA

miRNA*
ATTTTGAGGCGGAGCGAGTAT

mismatches: 1
bulges: 0

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pre-miRNA
CTTACAGTATGCTCCCTCCGTCTCAAAATAAGTGTCTCAGCTTTATACTAGTTTTAGTATAAAGTTATACTAAGCTTGAAACATTTATTTTGAGGCGGAG
CGAGTAT
TAATCAT


dot-bracket secondary structure
........((((((.((((((((((((((((((((.((((((((((((((....)))))))))))...........))).))))))))))))))))))))
.))))))
.......



SIMILARITIES
miRBase osa-MIR812k: 0.0003

PMRD hpr-miR1120: 0.00000002

microPC miR1439: 4e-19
UniProt no hits

RFAM MIR1122: 5e-19
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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