miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
ABOUT THIS RECORD
ID:
MNEST001137
species:
Hordeum vulgare
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGGACAGAGGGAGTATG
miRNA*
TAATCCCTCAGTCCCAAAATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
ATTTTGTTTCA
TAATCCCTCAGTCCCAAAATA
AGTGTCTTAACTCTAGTACAATTTTGTACTAAAGTTAGTACAAACTTGAGACACTTA
TTTTGGGACAG
AGGGAGTATG
AAGTACTC
dot-bracket secondary structure
......(((((
((.((((((.(((((((((((
((((((((((((.(((((((....))))))).))))(((....))).))))))))))
))))))))).)
))))).))))
))).....
SIMILARITIES
miRBase
tae-MIR1137
:
0.00000009
PMRD
hpr-miR1120
:
0.000000002
microPC
miR1439
:
3e-17
UniProt
no hits
RFAM
MIR1122: 1e-25
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record