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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum



ABOUT THIS RECORD

ID: MNEST000935
species: Hordeum vulgare
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCC

miRNA*
AATGACNCCGGGTCCNAAA

mismatches: 4
bulges: 0

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pre-miRNA
TTTCGCGTCATGGTTGTCGAGGGGAATGACNCCGGGTCCNAAAGAGAGACNCTCGCATGGCGTGCGCGTGGTGCGTTTCGGACCAGGCTTCATTCCCCAT
GACTCCATCATGGTTCA


dot-bracket secondary structure
.....(((.((((..((((.(((((((((..((.(((((.(((..........(((((.(((....))).)))))))).))))).))..))))))))).)
))).)))).))).....



SIMILARITIES
miRBase hvu-MIR166: 2e-46

PMRD hvv-miR166: 2e-33

microPC miR166: 2e-33
UniProt no hits

RFAM mir-166: 4e-38
most similar mature miRNAs

Identical with: hvv-miR166 from PMRD (MNEST048660)

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
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