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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum



ABOUT THIS RECORD

ID: MNEST000950
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCCGTTCCTAAATATAAGTC

miRNA*
 CTATATGTCTACATACGGAGCA

mismatches: 5
bulges: 1
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pre-miRNA
 CATAATACTTCCTCCGTTCCTAAATATAAGTCTTTTAAGCGATTTCACTATATGTCTACATACGGAGCAAAATG

dot-bracket secondary structure
........((.((((((...((.((((((((.....((....))..))).))))).))...)))))).))....


SIMILARITIES
miRBase tae-MIR1126: 0.00000005

PMRD tae-miR1126: 0.00000005

microPC miR1436: 2e-16		UniProt no hits

RFAM MIR1122: 1e-27		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
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