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Species belonging to selected taxon:
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
ABOUT THIS RECORD
ID:
MNEST000995
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTCTCAAAATA
miRNA*
TTTTAGGACCGAGGGAATATA
mismatches:
3
bulges:
0
View larger
pre-miRNA
GGCTTCTGTTA
TACTCCCTCCGTCTCAAAATA
ACTGTCTCAACTTTGTATTAGCTCTAGTACAAAGTTGTACTAAGCTTAAGACACTTA
TTTTAGGACCG
AGGGAATATA
TAGCATAG
dot-bracket secondary structure
.(((.....((
((.((((((.((((.((((((
(.((((((((((((((((((....)))))))))))))...........))))).)))
)))).)))).)
))))).))))
.)))....
SIMILARITIES
miRBase
no hits
PMRD
bdi-miR2502
:
0.0000004
microPC
miR1439
:
1e-31
UniProt
no hits
RFAM
MIR1122: 1e-53
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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