ABOUT THIS RECORDspecies: Apis mellifera
miRNA family: mir-316
source: miRBase, original name: ame-mir-316 (MI0010619)
Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTCTTTTTCCGCTTTGCTGCCG miRNA* AGCAAAGGGGAACAGGCCGA mismatches: 4 bulges: 1 |
pre-miRNA
GTGTGGCCGAGGGTGTGTCTTTTTCCGCTTTGCTGCCGCTGAAATGGAGTCCGCCAGCAAAGGGGAACAGGCCGACCCTCCCGCACCAA
dot-bracket secondary structure
((((((..((((((..((((.(((((.((((((((..((.((.......)).))))))))))))))).))))..))))))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
GTGTGGCCGAGGGTGTGTCTTTTTCCGCTTTGCTGCCGCTGAAATGGAGTCCGCCAGCAAAGGGGAACAGGCCGACCCTCCCGCACCAA
dot-bracket secondary structure
((((((..((((((..((((.(((((.((((((((..((.((.......)).))))))))))))))).))))..))))))))))))...
SIMILARITIES| miRBase tca-mir-316: 0.00000002 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
