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Species belonging to selected taxon:

Nasonia vitripennis, Nasonia giraulti, Bombus terrestris, Solenopsis invicta, Apis mellifera



ABOUT THIS RECORD

ID: MNEST037592
species: Nasonia giraulti
miRNA family: mir-317
source: miRBase, original name: ngi-mir-317 (MI0016649)

Taxonomy by NCBI:
Nasonia giraulti Nasonia Pteromalinae Pteromalidae Chalcidoidea Chaldicoidea group Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAACACAGCTGGTGGTATCTCAGT

miRNA*
AGGGAGCCACTCTGCGTTCACT

mismatches: 2
bulges: 3

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pre-miRNA
CTCGGAGAACAGGGAGCCACTCTGCGTTCACTCGGTAAGTAAAGAAGCGGGTGAACACAGCTGGTGGTATCTCAGTTTTCTGAGGGC

dot-bracket secondary structure
((((((((((.(((((((((((((.(((((((((.(.........).))))))))).)))..)))))).)))).))))))))))...


SIMILARITIES
miRBase nvi-mir-317: 6e-42

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-317: 7e-36

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Sathyamurthy G, Swamy NR, Int J Insect Sci. 2:1-13(2010)., "Computational Identification and Characterization of Putative miRNAs in Nasonia Species"




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