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Species belonging to selected taxon:
Ipomoea batatas
,
Ipomoea nil
ABOUT THIS RECORD
ID:
MNEST046439
species:
Ipomoea batatas
source:
microPC, original name:
miR530
Taxonomy by NCBI:
Ipomoea batatas
Ipomoea
Ipomoeeae
Convolvulaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCATTTACACCTGCACCT
miRNA*
GTGCAGAAGTAACTGCA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TGCATTTACACCTGCACCT
GCACTTGCCTCAGCCCAGATCGAAAGCCTAGCTGCTGTGGTTGCGCCGCCGCATGATGGTGTATGTGCGGCCGGCCGGCCG
GAAAATGATGATGGGATGAGCTGAGGTAGGTAGTAG
GTGCAGAAGTAACTGCA
dot-bracket secondary structure
.(((.((((..((((((((
((((((((((((((.((..(((..(((......)))..(((((.((((((((((..........)))))).))))))))).
...........)))..)).)))))))))))).))))
))))))..)))).))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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