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Species belonging to selected taxon:

Ipomoea batatas, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST046717
species: Ipomoea batatas
miRNA family: MIR168
source: microPC, original name: miR168

Taxonomy by NCBI:
Ipomoea batatas Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGCTTGGTGCAGGTCGGGAA

miRNA*
 CCCGCCTTGCATCAACTGA

mismatches: 3
bulges: 0
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pre-miRNA
 TCGCTTGGTGCAGGTCGGGAACTGCCGCCGCCGGCTGAGCGGAGACGGTTGCGTCGTCGTCTCCGGCGAATTTAGCTCCCGCCTTGCATCAACTGA

dot-bracket secondary structure
(((.((((((((((.(((((.(((....((((((..((.((..((((....))))..)))).))))))....))).))))).)))))))))).)))


SIMILARITIES
miRBase ptc-MIR168b: 0.000001

PMRD hte-miR168: 0.0000003

microPC miR168: 1e-49		UniProt no hits

RFAM MIR168: 0.00002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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