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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST002806
species: Triticum turgidum subsp. durum
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCCATCTGTAAAGAAATATGA

miRNA*
ATATTTCCTTGCGGAGNAGT

mismatches: 3
bulges: 1

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pre-miRNA
TATAAACTACTCCATCTGTAAAGAAATATGAGAGTGTTTAGATCACTATTTTGCTTTTATATTTCCTTGCGGAGNAGTAGTTTCT

dot-bracket secondary structure
...((((((((...(((((((.((((((((((((((..(((....)))...)))))))))))))).)))))))..))))))))..


SIMILARITIES
miRBase tae-MIR1121: 0.00000000002

PMRD tae-miR2033b: 0.000000000001

microPC miR1121: 0.00002
UniProt no hits

RFAM MIR1122: 0.00000000008
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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