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Species belonging to selected taxon:

Limnanthes alba



ABOUT THIS RECORD

ID: MNEST001399
species: Limnanthes alba
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Limnanthes alba Limnanthes Limnanthaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCACTGCCTCTTCCCTGGCT

miRNA*
GCAGGGAACAGACAGAGCATG

mismatches: 4
bulges: 0

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pre-miRNA
AGTATAGACAGAGGCAGGGAACAGACAGAGCATGAATGGAACTACTAACACGTTTACCTGTTTCTGCTCTACCCATGCACTGCCTCTTCCCTGGCTCTCT
CACTCT


dot-bracket secondary structure
......((.((((.(((((((.((.(((.(((((..((((......((((........)))).....))))..))))).))).)).))))))).)))).)
).....



SIMILARITIES
miRBase ptc-MIR408: 4e-16

PMRD ptc-miR408: 4e-16

microPC miR408: 4e-16
UniProt no hits

RFAM MIR408: 0.000000000000006
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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