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Species belonging to selected taxon:

Linum usitatissimum



ABOUT THIS RECORD

ID: MNEST001403
species: Linum usitatissimum
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Linum usitatissimum Linum Linaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGGGAACAGACAGAGCATGG

miRNA*
ATGCACTGCCTCTTCCCTGGCC

mismatches: 3
bulges: 1

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pre-miRNA
GAGGTAAGAAGGAAGACGAGAAAAAAAGAGGCTGGGAACAGACAGAGCATGGATAGAGCTTACTTACAGAAACCCTTTTGTTTTGACCCTTCCCATGCAC
TGCCTCTTCCCTGGCC
TTTTTCCCTCTTCTCTTCCACCCTCTTT


dot-bracket secondary structure
((((......((((((.((((...((((((((((((((.((.(((.((((((...(((.......((((((....)))))).......))).)))))).)
)).)).))))).))))
)))))...)))).))))))..))))...



SIMILARITIES
miRBase ptc-MIR408: 0.00000003

PMRD ptc-miR408: 0.00000003

microPC miR408: 0.00000003
UniProt no hits

RFAM MIR408: 0.0000005
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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