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Species belonging to selected taxon:
Lottia gigantea
ABOUT THIS RECORD
ID:
MNEST038883
species:
Lottia gigantea
miRNA family:
mir-279
source:
miRBase, original name:
lgi-mir-279
(
MI0010134
)
Taxonomy by NCBI:
Lottia gigantea
Lottia
Lottiidae
Acmaeioidea
Nacellina
Docoglossa
Eogastropoda
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACTAGATCCACACTCATCCA
miRNA*
GGTGATTGTGAGTCTGGTGCATG
mismatches:
3
bulges:
1
View larger
pre-miRNA
GGCAGAGGTTAACCGATAAATG
GGTGATTGTGAGTCTGGTGCATG
TTCATGATGACGTCA
TGACTAGATCCACACTCATCCA
CAGAAGCGGGAAAAATCA
T
dot-bracket secondary structure
....((..((..(((.....((
(((((.((((..((((((.((((
.((.....))...))
))))))))..)))).)))))))
......)))..))..)).
.
SIMILARITIES
miRBase
isc-mir-279
:
0.0000000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-279: 0.000000006
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"