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Species belonging to selected taxon:
Lottia gigantea
ABOUT THIS RECORD
ID:
MNEST038866
species:
Lottia gigantea
miRNA family:
mir-99
source:
miRBase, original name:
lgi-mir-100
(
MI0010119
)
Taxonomy by NCBI:
Lottia gigantea
Lottia
Lottiidae
Acmaeioidea
Nacellina
Docoglossa
Eogastropoda
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AACCCGTAGATCCGAACTTGTG
miRNA*
CAAGCTTGTTTCTAGGGGTCCT
mismatches:
5
bulges:
0
View larger
pre-miRNA
ATTAGTGACTAGTTAATATA
AACCCGTAGATCCGAACTTGTG
ATAAAATCTGACG
CAAGCTTGTTTCTAGGGGTCCT
ATATTGGCTAGGGTATCTACAGA
T
dot-bracket secondary structure
..(((...((((((((((((
.((((.((((..(((.((((((
.((.....)).))
)))).)))..)))).))))..)
))))))))))).....)))....
.
SIMILARITIES
miRBase
bfl-mir-100
:
0.0000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-10: 0.000005
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"