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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST046258
species: Bruguiera gymnorhiza
source: microPC, original name: miR396

Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAAC

miRNA*
TCAAGAAAGCTGTGGGA

mismatches: 1
bulges: 0

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pre-miRNA
TTCCACAGCTTTCTTGAACTTTCTTGAACTGCTTTTTATAATTTTTGTATATAGCACCATACATGGAAGCTCAAGAAAGCTGTGGGA

dot-bracket secondary structure
(((((((((((((((((.(((((.((...((((...((((.....))))...)))).....)).))))).)))))))))))))))))


SIMILARITIES
miRBase ptc-MIR396e: 0.00000007

PMRD ptc-miRf11357-akr: 0.00000007

microPC miR396: 3e-44
UniProt no hits

RFAM MIR396: 0.000001

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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