miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Medicago sativa
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST040649
species:
Medicago truncatula
miRNA family:
MIR156
source:
miRBase, original name:
mtr-MIR156b
(
MI0005571
)
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTCTCTATCTGTCACC
mismatches:
0
bulges:
1
View larger
pre-miRNA
GGAGG
TGACAGAAGAGAGTGAGCAC
ACATGGTACTTTCGTGTATGATGTTTCATTCTCGAAGCTATGTGT
GCTCACTCTCTATCTGTCACC
CCAT
dot-bracket secondary structure
((.((
((((((((((((((((((((
(((((((...((((.(.((((....)))).).)))))))))))))
))))))))))).)))))))))
))..
SIMILARITIES
miRBase
rco-MIR156c
:
3e-22
PMRD
ptc-miRf10647-akr
:
2e-17
microPC
miR156
:
0.0000000000003
UniProt
no hits
RFAM
mir-156: 2e-42
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
degradome data
download this record
references
[
1
] Bonnet E,
Unpublished (2007).
,