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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST040650
species: Medicago truncatula
miRNA family: MIR156
source: miRBase, original name: mtr-MIR156c (MI0005584)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCAC

miRNA*
 GCTTACTCTCTATCTGTCACC

mismatches: 0
bulges: 1
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pre-miRNA
 GGTGGTGACAGAAGAGAGTGAGCACACATGGTGTTTTCTTGCACGATTATGTTTCCTGCTTGAAGCTATATGTGCTTACTCTCTATCTGTCACCCCAC

dot-bracket secondary structure
((.(((((((((((((((((((((((.(((((...(((..(((.((.......)).)))..)))))))).)))))))))))))).)))))))))))..


SIMILARITIES
miRBase aly-MIR156f: 3e-19

PMRD ath-miR156e: 2e-17

microPC miR156: 0.00000000008		UniProt no hits

RFAM mir-156: 1e-16

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
degradome data
download this record

references
[1] Bonnet E, Unpublished (2007).,



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