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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST040670
species: Medicago truncatula
miRNA family: MIR166
source: miRBase, original name: mtr-MIR166c (MI0005581)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCTC

miRNA*
GGAACGCAGTCTGGCTCGAGG

mismatches: 4
bulges: 0

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pre-miRNA
GCTGAGAGGAACGCAGTCTGGCTCGAGGAATGCTCAGATCTGTTTTGATCTGATCGATATGTTCATATCTAATTAATTCTCGGACCAGGCTTCATTCCTC
CCATC


dot-bracket secondary structure
..((.((((((.(.(((((((..((((((....(((((((......)))))))..(((((....))))).......))))))..))))))).).))))))
.))..



SIMILARITIES
miRBase ptc-MIR166q: 0.000001

PMRD pvu-miR166: 0.000001

microPC miR166: 0.000005
UniProt no hits

RFAM mir-166: 1e-53

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Bonnet E, Unpublished (2007).,




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