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Species belonging to selected taxon:
Medicago sativa
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST040670
species:
Medicago truncatula
miRNA family:
MIR166
source:
miRBase, original name:
mtr-MIR166c
(
MI0005581
)
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCTC
miRNA*
GGAACGCAGTCTGGCTCGAGG
mismatches:
4
bulges:
0
View larger
pre-miRNA
GCTGAGA
GGAACGCAGTCTGGCTCGAGG
AATGCTCAGATCTGTTTTGATCTGATCGATATGTTCATATCTAATTAATTC
TCGGACCAGGCTTCATTCCTC
CCATC
dot-bracket secondary structure
..((.((
((((.(.(((((((..(((((
(....(((((((......)))))))..(((((....))))).......)))
)))..))))))).).))))))
.))..
SIMILARITIES
miRBase
ptc-MIR166q
:
0.000001
PMRD
pvu-miR166
:
0.000001
microPC
miR166
:
0.000005
UniProt
no hits
RFAM
mir-166: 1e-53
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Bonnet E,
Unpublished (2007).
,