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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST040675
species: Medicago truncatula
miRNA family: MIR166
source: miRBase, original name: mtr-MIR166h (MI0005628)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCCC

miRNA*
GGAATGGTGTCTGATTCGAGA

mismatches: 2
bulges: 0

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pre-miRNA
GTTCAGGGGAATGGTGTCTGATTCGAGACCATTCGTCACAAGTAAACAGTAGCCTTGAGAATGATCTCGGACCAGGCTTCATTCCCCCTAGC

dot-bracket secondary structure
(((..(((((((((.(((((.(((((((.(((((....((((...........)))).))))).))))))).))))).)))))))))..)))


SIMILARITIES
miRBase mtr-MIR166: 3e-47

PMRD mtr-miR165: 3e-41

microPC miR166: 0.00000002
UniProt no hits

RFAM mir-166: 5e-46

Identical with: mtr-miR165 from PMRD (MNEST048711)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Bonnet E, Unpublished (2007).,




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