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Species belonging to selected taxon:
Medicago sativa
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST040675
species:
Medicago truncatula
miRNA family:
MIR166
source:
miRBase, original name:
mtr-MIR166h
(
MI0005628
)
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCCC
miRNA*
GGAATGGTGTCTGATTCGAGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
GTTCAGG
GGAATGGTGTCTGATTCGAGA
CCATTCGTCACAAGTAAACAGTAGCCTTGAGAATGATC
TCGGACCAGGCTTCATTCCCC
CTAGC
dot-bracket secondary structure
(((..((
(((((((.(((((.(((((((
.(((((....((((...........)))).))))).))
))))).))))).)))))))))
..)))
SIMILARITIES
miRBase
mtr-MIR166
:
3e-47
PMRD
mtr-miR165
:
3e-41
microPC
miR166
:
0.00000002
UniProt
no hits
RFAM
mir-166: 5e-46
Identical with:
mtr-miR165
from PMRD (
MNEST048711
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Bonnet E,
Unpublished (2007).
,