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Species belonging to selected taxon:
Medicago sativa
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST040688
species:
Medicago truncatula
miRNA family:
MIR169_2
source:
miRBase, original name:
mtr-MIR169k
(
MI0005632
)
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGCCAAGGGTGATTTGCCGG
miRNA*
GGCAAGTTCCTCTTGGCTACA
mismatches:
3
bulges:
0
View larger
pre-miRNA
GAATG
CAGCCAAGGGTGATTTGCCGG
CAGATATATATGAATATTCATAGAGATGCATGTGTC
GGCAAGTTCCTCTTGGCTACA
TT
dot-bracket secondary structure
.((((
.(((((((((..(((((((((
((.((((.(((((....)))))...))..)).))))
)))))))..))))))))).))
))
SIMILARITIES
miRBase
mtr-MIR169c
:
4e-43
PMRD
ptc-miR169g
:
0.0002
microPC
no hits
UniProt
no hits
RFAM
MIR169_2: 7e-42
Identical with:
mtr-MIR169c
from miRBase (
MNEST040680
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Bonnet E,
Unpublished (2007).
,