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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST040697
species: Medicago truncatula
miRNA family: MIR171_1
source: miRBase, original name: mtr-MIR171c (MI0005597)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGATTGAGCCGTGCCAATATT

miRNA*
TATTGGCTTGGTTCACTCAGA

mismatches: 2
bulges: 0

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pre-miRNA
ATTGAGATATTGGCTTGGTTCACTCAGAAGAAACAAAAAATAACACTACTTGTGAATGTTTTGATTTTGATTTTGATTTTGATTGAGCCGTGCCAATATT
TCAAA


dot-bracket secondary structure
.(((((((((((((.(((((((.(((((((((((((((.....(((.....)))....))))).))))........)))))).))))))).)))))))))
)))).



SIMILARITIES
miRBase mtr-MIR171g: 0.00002

PMRD mtr-miR171g: 0.00002

microPC no hits
UniProt no hits

RFAM MIR171_1: 1e-25

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Bonnet E, Unpublished (2007).,




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