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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST040736
species: Medicago truncatula
miRNA family: MIR399
source: miRBase, original name: mtr-MIR399f (MI0005587)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGATTTGCCCAG

miRNA*
 GGGTGAGTTCTCCATTGGCAGG

mismatches: 5
bulges: 1
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pre-miRNA
 TTACAGGGTGAGTTCTCCATTGGCAGGTAGCTAGTCACTATATGATATGCATTGCAATTCATCTCTTAGTGTGCAATCTGCCAAAGGAGATTTGCCCAGC
GATT

dot-bracket secondary structure
.....(((..(((.((((.(((((((((.((....(((((.((((..(((...)))..))))....))))).)).))))))))).)))))))..)))...
....


SIMILARITIES
miRBase mtr-MIR399a: 3e-47

PMRD mtr-miR399a: 3e-47

microPC miR399: 0.00000000002		UniProt no hits

RFAM mir-399: 1e-50

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Bonnet E, Unpublished (2007).,



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