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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST040737
species: Medicago truncatula
miRNA family: MIR399
source: miRBase, original name: mtr-MIR399g (MI0005588)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGATTTGCCCAG

miRNA*
 GGGCATGTTCTCCTTTGGCAGG

mismatches: 4
bulges: 1
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pre-miRNA
 TTACAGGGCATGTTCTCCTTTGGCAGGTAGCCATATGCTATGATATGCATTGCAACCATACTCTTTGAGTGTGTAACCTGCCAAAGGAGATTTGCCCAGC
AATT

dot-bracket secondary structure
.....(((((...(((((((((((((((.((...((((........)))).))...(((((((...)))))))..)))))))))))))))..)))))...
....


SIMILARITIES
miRBase mtr-MIR399e: 0.00000000008

PMRD mtr-miR399e: 0.00000000008

microPC miR399: 0.00002		UniProt no hits

RFAM mir-399: 4e-53

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Bonnet E, Unpublished (2007).,



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