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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST040745
species: Medicago truncatula
miRNA family: MIR399
source: miRBase, original name: mtr-MIR399o (MI0005610)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGAGCTGCCCTG

miRNA*
 GGGCATGTCTCTATTGGCAGG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AGTCATAGGGCATGTCTCTATTGGCAGGTGATATTTCATTTGACTTAGAGGCTCTAGAAATTCACTTGCCAAAGGAGAGCTGCCCTGCGAGT

dot-bracket secondary structure
..((.(((((((..(((((.(((((((((((.(((((....((((....)).))..)))))))))))))))).)))))..))))))).))..


SIMILARITIES
miRBase mtr-MIR399n: 1e-27

PMRD mtr-miR399d: 3e-25

microPC miR399: 0.00007		UniProt no hits

RFAM mir-399: 0.00002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Bonnet E, Unpublished (2007).,



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