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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008351
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTACTCCCTCCGTCCCAAATT

miRNA*
TTTGGGNNGGAGGGAGTATAT

mismatches: 3
bulges: 0

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pre-miRNA
GTTCACCCCTCTTACTCCCTCCGTCCCAAATTGTATGACGTTTTGGGCATTTCACACATATTAAGAAATGCAATTAATATTGNGNGGAAAAGAGATATTA
TGAGTTGTTTTACAAAATTGTCCTTAATAAATAATATGGGAAAGATAAATGAAAGAATTGAAAGAAGAGAGAGTAATAAATAATTAAGGNTATAATAGGA
AAAGTAACATTAATGNTGCATTGGTATTTTAAAGCGACATATAATTTGGGACAATTTTTTTTTTTCCTAAAGCGACATACAATTTGGGNNGGAGGGAGTA
TAT
TATATTAT


dot-bracket secondary structure
............((((((((((..(((((((((((((.(((((((((((((((...........)))))))...(((((((............)))))))
..((((.(((((....(((.((((..((.....))..))))..)))...))))).))))((((((((((((.((..(((((.((..((..(((.......
...)))...)).(((.(((.((((....)))).))).))))).)))))..))..)))))))))))))))))))).)))))))))))))..))))))))))
...
........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM MIR806: 0.0003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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