ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIR2614
source: miRNEST
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGTTCGGCTCGTTAGGTTCA miRNA* AACCTGTCTGAGCTCGACTCGAT mismatches: 2 bulges: 2 |
pre-miRNA
GGAAATGAGATGAGTCAAATTGAACCTGTCTGAGCTCGACTCGATAAAATTTTGTTCAGCTCGAAACTCGACTCTAGTTCGTTACGAACATATTTTTCAG
CTCGAACTCGACTCGGTTCGAGTTCGCAAACAACTCGGTTCGGCTCGTTAGGTTCAGTTCAGTTGCTCGAATAAC
dot-bracket secondary structure
..........(((((..(((((((((((..(((((.(((.((((......(((((..((((((((..((((.((.((((((....(((.......)))..
..)))))).)).)))))))))))).)))))....)))).)))))))).))))))))))).....)))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGAAATGAGATGAGTCAAATTGAACCTGTCTGAGCTCGACTCGATAAAATTTTGTTCAGCTCGAAACTCGACTCTAGTTCGTTACGAACATATTTTTCAG
CTCGAACTCGACTCGGTTCGAGTTCGCAAACAACTCGGTTCGGCTCGTTAGGTTCAGTTCAGTTGCTCGAATAAC
dot-bracket secondary structure
..........(((((..(((((((((((..(((((.(((.((((......(((((..((((((((..((((.((.((((((....(((.......)))..
..)))))).)).)))))))))))).)))))....)))).)))))))).))))))))))).....)))))......
SIMILARITIES| miRBase mtr-MIR2614: 0.0000000000006 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
