miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008384
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCCGTCCCTGAATA

miRNA*
 TTAAGGGACGGAGGGAGTAAT

mismatches: 1
bulges: 0
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pre-miRNA
 GAAAGAACTATTAATGATATGGTACTCCCTCCGTCCCTGAATAAGTGACCTATTTGTAAAAAATATTTGTCCCACAATACTTGACCTTCTCAGATTTCTA
AGCAAAATTTGACAGATTTACCCCTTATAAATACTTTTTGTGGTCCCCATGTTAAAGTTTGTAGTGGAACAAAGAAAGTAATCATTGCTTAAAAGTGAAA
AAGTTTCAAAATAATGACAAGGGCAACTCAGTAAAAGTATCACTCTCTTTCTTTCATCTTTACACTTTTCTTAATCTGTGTGAAATGGTCAAATAGGTCA
CTTATTAAGGGACGGAGGGAGTAATTGTTTTCAAGTATCAGTCA

dot-bracket secondary structure
((..((..((((..(((.(((.((((((((((((((((.((((((((((((((((....)))....((((...))))...(((((((((.((((((((((
.(((((.(((((((.....(((...((.(((...))).)).))).....))))))).)))))..)))))..(((((((...((((((........(((((
...)))))...))))))...((....))..(((((.((.................)).)))))..))))))).)))))...)))..)))))).)))))))
)))))).))))))))))))))))..)))..)))))))))..)).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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