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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008387
species: Medicago truncatula
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTTGGGACGGAGGGAGTATG

miRNA*
 TACTCCCTCCGTCCCAAATTG

mismatches: 0
bulges: 0
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pre-miRNA
 ATGAGTCGTGAATATATTATACTCCCTCCGTCCCAAATTGTATGACGTTTTAGACATTTCACATATATTAAAAAATGTAATATATTTTGTGTGGAAAAGA
GATATTATGAGTTGTTTTACAAAATTGTCCTTAATAAATGATATGGGAAAGATAAATGAAAGAATTGAAAGAAGAGAAAGTAATAAATAGTTAAGGATAT
AATAGGAAAAATAACATTAATGTTTCATTGGTATTGTAAAGCAACATATAATTTGGGACAAAATTTTTCTCCAAAGCGACATACAATTTGGGACGGAGGG
AGTATGATTTTTCTAATGTTTC

dot-bracket secondary structure
.........(((...(((((((((((((((((((((((((((((.((((((..((((.....((((((((.......))))))))...))))(((((((.
...((((((.((((((((((((.(((.((((..((.....))..))))..))).(((((((..(((((................................
................))))).)))))))....)))))))))))).))))))...........)))))))..)))))).)))))))))))))))))))))
))))))))..))).........


SIMILARITIES
miRBase tae-MIR1122: 0.0003

PMRD osa-miRf10302-akr: 0.00007

microPC no hits		UniProt no hits

RFAM MIR1122: 0.00008		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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