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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008391
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTACTCCCTCCGTCCCAAAT

miRNA*
TTGGAGATAGAGGGACAAAGGC

mismatches: 5
bulges: 1

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pre-miRNA
GTGAGTCTAGGGTGAAGCTCTTATTGGAGATAGAGGGACAAAGGCTTGGAGTCTCCGTTACTTACTCCCTCCGTCCCAAATTGTATGTCGCTTTAAGGAG
A


dot-bracket secondary structure
.....((((((((((.((.....((((.(((.((((((..(((...((((...))))...)))..)))))).)))))))...))...)))))))..))).
.



SIMILARITIES
miRBase no hits

PMRD osa-miRf11219-akr: 0.00008

microPC no hits
UniProt no hits

RFAM MIR1122: 0.0003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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