miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008406
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCCGTCCCTATATG

miRNA*
 TATAGGGACGGAGGGAGTAGT

mismatches: 0
bulges: 0
View larger
pre-miRNA
 NTGAAAAACTTTGTCCTCATGTACTCCCTCCGTCCCTATATGTAACCCCCCGTTGCTTTTTTCACATTTCTTAAGAAAAGTTGTTAGTGTAGTTAATGTG
TCTATTTTATGTGTTAATATTACTAAATTGTCCTTTGTTTGTATGTGTATTAAATTTGACTTTTTGTATTTTAAGACAAATTAGTAGGATTAATGAGGGG
TATGTTTAGGAAAATAATAGTAAATGCATCTAGTAATTTGAAAAGGAGTTTACATTTAAGGACAAAAATAAAATCAAATGGGTGCTTACATATAGGGACG
GAGGGAGTAGTATATANGGGAAAATGTTA

dot-bracket secondary structure
......(((.((.((((.(((((((((((((((((((((((((((...((((((...((((..((.((((....)))).))..((((((..((((((...
............))))))..)))))).((((((((.......(((((.(((...(((.(((.(((((........)))))..))).((((((...(((.(
(((..(((.........)))...)))).)))..))))))..)))..))).)))))..))))))))....))))...))))))...)))))))))))))))
)))))))))...)))..)))).)).))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM MIR1122: 0.00000008		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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