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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008417
species: Medicago truncatula
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAAGGGACGGAGGGAGTACCC

miRNA*
ATACTCCCTCCGTCCCTTAAT

mismatches: 3
bulges: 0

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pre-miRNA
ACCATATTAAATGATACTCCCTCCGTCCCTTAATAAGTGACCCATTTGGAATTTTTTTAATTTTGACCTAACTGACTTTGACCGTATTTTTCAACTAATA
TACAAAGATAAATAACATCATATAAGATGTCGTTAGATTCGTCTCGATGAGTATTTTCAAAATATCAAATTTTCATAATTTTTTCCAATATATTATTCAA
GATATTTAAACTCAAAATTACGCATTGGTATGCGTAATTGAGTCAACTAGGTCACTTATTAAGGGACGGAGGGAGTACCCTTTTACAAAT


dot-bracket secondary structure
..(((.....))).((((((((((((((((((((((((((((...((((((.......((((.(((......(((.(((((..((((((.((..((....
.....))...(((.(((((......))))).)))(((....))).)).))))))..)))))...))).....))).))))..)))))).(((((......
)))))((..((((((..((((((((....)))))))))))))).))...)))))))))))))))))))))))))))).............



SIMILARITIES
miRBase no hits

PMRD ata-miR1122: 0.00006

microPC miR1439: 0.001
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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