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Species belonging to selected taxon:
Medicago sativa
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST008417
species:
Medicago truncatula
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAGGGACGGAGGGAGTACCC
miRNA*
ATACTCCCTCCGTCCCTTAAT
mismatches:
3
bulges:
0
View larger
pre-miRNA
ACCATATTAAATG
ATACTCCCTCCGTCCCTTAAT
AAGTGACCCATTTGGAATTTTTTTAATTTTGACCTAACTGACTTTGACCGTATTTTTCAACTAATA
TACAAAGATAAATAACATCATATAAGATGTCGTTAGATTCGTCTCGATGAGTATTTTCAAAATATCAAATTTTCATAATTTTTTCCAATATATTATTCAA
GATATTTAAACTCAAAATTACGCATTGGTATGCGTAATTGAGTCAACTAGGTCACTTAT
TAAGGGACGGAGGGAGTACCC
TTTTACAAAT
dot-bracket secondary structure
..(((.....)))
.((((((((((((((((((((
((((((((...((((((.......((((.(((......(((.(((((..((((((.((..((....
.....))...(((.(((((......))))).)))(((....))).)).))))))..)))))...))).....))).))))..)))))).(((((......
)))))((..((((((..((((((((....)))))))))))))).))...))))))))))
))))))))))))))))))...
..........
SIMILARITIES
miRBase
no hits
PMRD
ata-miR1122
:
0.00006
microPC
miR1439
:
0.001
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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