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Species belonging to selected taxon:

Medicago sativa, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008425
species: Medicago truncatula
miRNA family: MIRf469
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTGTAATCCCAGCACTTTGG

miRNA*
AAAAATTGGGAAATGGGCT

mismatches: 3
bulges: 2

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pre-miRNA
TCTCTGCCCTTTTTAATGTTTCTGTTTTGTCTCTTAACCTTTAAAAATTGGGAAATGGGCTGGGTGCAGTGACTCATGCCTGTAATCCCAGCACTTTGGG
GGGCTGAAGCAGGTTGATTGCTTGATGTCAGGAGTTCA


dot-bracket secondary structure
.((((.......((((.((.((...(((((.((....((((((((..((((((.(((((((((((......))))).))))))..))))))...))))))
))...)).)))))..))..)))))).....))))....



SIMILARITIES
miRBase hsa-mir-619: 0.0000000004

PMRD ptc-miRf12412-akr: 0.000000007

microPC no hits
UniProt no hits

RFAM Metazoa_SRP: 4e-20
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
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